Data Freeze 2

Data files of DOGA project

The data from the DoGA project has been divided into three freezes based on its publications.

FREEZE 2

This freeze contains all the data used in the publication.

1. README.md

2. Reference genome

3. Raw data (FASTQ)

4. CTSS (BED format) and (BAM format)

5. Promoters data

6. Enhancers data

7. Enhancers matched to any of the non-coding RefSeq RNAs and Enhancer datasets non-coding transcripts filtered

8. CAGE-based Promoter-Enhancer interaction (BED files: Comprehensive, Robust, TSV: Tissue-enriched interactions )

9. Motif files

10. Vignette 1: Enhancer activity during early development in days 20-25 and 30

11. Vignette 2: Dog behavioral SNPs clusters with enhancers and promoters

12. Vignette 3: Enhancer sequence similarity between dogs and humans